Reactome: A Curated Pathway Database
Developer's Zone


The following table contains the list of known resources that have integrated Reactome either using the Analysis Service or the widgets (or both). If you are using either of our services or widgets in your resource and it does not appear in the list, please let us know.

External Resource Short Description Analysis Service Widgets
HPA The Human Protein Atlas contains information for a large majority of all human protein-coding genes regarding the expression and localization of the corresponding proteins based on both RNA and protein data.Learn more
PRIDE The PRIDE PRoteomics IDEntifications (PRIDE) database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence.Learn more
Blueprint The BLUEPRINT consortium has been formed with the aim to further the understanding of how genes are activated or repressed in both healthy and diseased human cells. BLUEPRINT will focus on distinct types of haematopoietic cells from healthy individuals and on their malignant leukaemic counterparts.Learn more
iLINCS iLINCS (Integrative LINCS) is an integrative web platform for analysis of LINCS data and signatures. The portal provides biologists-friendly user interfaces for analyzing transcriptomics and proteomics LINCS datasets. The BD2K-LINCS Data Coordination and Integration Center is part of the Big Data to Knowledge (BD2K) NIH initiative.Learn more
COPaKB The COPa Knowledgebase (COPaKB) has been created as a unique resource to facilitate the discovery of novel biological insights from proteomic datasets. COPaKB was developed under the NHLBI Proteomics Centers Program (2010-2015) and is continuously supported through the NIGMS BD2K Centers Program (2014-2018).Learn more
Open Targets For biomedical researchers who need to identify a biological target for a new therapy, Open Targets is a public-private initiative to generate evidence on the validity of therapeutic targets based on genome-scale experiments and analysis.Learn more

Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds. The term ‘molecular entity’ refers to any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer, etc., identifiable as a separately distinguishable entity.Learn more

PINT, the Proteomics INTegrator, is an online experiment repository for final results coming from different qualitative and/or quantitative proteomics assays. PINT is a new comprehensive system to store, visualize, and analyze data for proteomics results obtained under different experimental conditions.Learn more

Integrated Proteomics Applications provides a comprehensive proteomic data analysis solution, the Integrated Proteomics Pipeline (IP2), which allows researchers to identify, quantify, and functionally analyze all of the proteins in a biological sample on one, easy to use interface.Learn more